Information for 11-ACGGTGAA (Motif 24)


Reverse Opposite:

p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.944
Number of Target Sequences with motif447.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif614.1
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets242.1 +/- 137.1bp
Average Position of motif in Background229.6 +/- 129.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0045.1_Myb_1/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTGAA---
NNNNTAACGGTTNNNAN

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACGGTGAA---
NNANTAACGGTTNNNAN

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGGTGAA-
---GTGGAT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACGGTGAA
GGAGGGGGAA

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGGTGAA---
GAAAGTGAAAGT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGGTGAA
-TGGGGA-

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACGGTGAA------------
AANGTGAAGNANNGTNAAGG

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACGGTGAA----
GNNACCGAGAATNNN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACGGTGAA
TCAAGGTCAN

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----ACGGTGAA---
TCTCAAAGGTCACGAG