Information for 20-GCCGCCCCGT (Motif 26)


Reverse Opposite:

p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.938
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets242.0 +/- 139.9bp
Average Position of motif in Background296.1 +/- 111.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)2.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCCCGT---
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GCCGCCCCGT---
TCACCCCGCCCCAAATT

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCCCGT----
GGTCCCGCCCCCTTCTC

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCCGT---
GCCCCGCCCCCTCCC

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCCCGT
GGCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCCGCCCCGT
NAGCCCCGCCCCCN

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCCGT
GCCCCGCCCCC-

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCGCCCCGT----
TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCCGT--
CCCCCGCCCCCGCC

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCCGT
GCCCCGCCCC--