Information for 15-ATGYACMC (Motif 27)


Reverse Opposite:

p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.903
Number of Target Sequences with motif1027.0
Percentage of Target Sequences with motif6.05%
Number of Background Sequences with motif1643.8
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets235.9 +/- 129.8bp
Average Position of motif in Background237.9 +/- 147.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ATGYACMC-----
NNTTTGCACACGGCCC

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATGYACMC------
NNNNGGTACCCCCCANN

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGYACMC------
AGCGGCACACACGCAA

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGYACMC-----
NNGTATGTGCACATNNN

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGYACMC------
CGAAGCACACAAAATA

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGYACMC
TCCAATCCACA-

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ATGYACMC----
TACATGTGCACATAAAA

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGYACMC----
TTATGTACTAATAA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATGYACMC-
SSAATCCACANN

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATGYACMC---
TNNATTATGCATANNTT