Information for 17-ACTGCAAG (Motif 29)


Reverse Opposite:

p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.530
Number of Target Sequences with motif685.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif1048.8
Percentage of Background Sequences with motif3.17%
Average Position of motif in Targets238.1 +/- 129.9bp
Average Position of motif in Background241.0 +/- 131.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAAG---
AATCGCACTGCATTCCG

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTGCAAG
CCAACTGCCA-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACTGCAAG---
CAATCACTGGCAGAAT

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAAG-
GAAAAAATTGCAAGG

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTGCAAG
ACCGGAAG

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAAG-
AACCGGAAGT

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAAG-
NACCGGAAGT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAAG---
AGATGCAATCCC

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.59
Offset:-14
Orientation:reverse strand
Alignment:--------------ACTGCAAG
TGGCCANNNNNGGAACTGCA--

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAAG
CCAACTGCCA-