Information for 21-GTAGGNACCTCA (Motif 31)


Reverse Opposite:

p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.931
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets233.9 +/- 121.7bp
Average Position of motif in Background247.4 +/- 99.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)3.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGNACCTCA
GGTTAGAGACCT--

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTAGGNACCTCA
------ACGTCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTAGGNACCTCA---
---NWAACCACADNN

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTAGGNACCTCA----
NNNNGGTACCCCCCANN

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTAGGNACCTCA--------
---GCAACCTCATTATNNNN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTAGGNACCTCA-
---NAAACCACAG

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTAGGNACCTCA
----TGACGTCA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTAGGNACCTCA--
----AAACCACAGC

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GTAGGNACCTCA
GGTAAGTA---------

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GTAGGNACCTCA---
----AAACCACAGAN