Information for 22-TCTGCCCGGC (Motif 32)


Reverse Opposite:

p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.943
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif40.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets234.6 +/- 128.0bp
Average Position of motif in Background254.2 +/- 126.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCTGCCCGGC
-CTGCCCGCA

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCCCGGC
NNGCNCTGCGCGGC

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTGCCCGGC-----
-ATGCCCGGGCATGT

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTGCCCGGC--
--TTCCCGCCWG

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTGCCCGGC-
NNTTCCCGCCC

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTGCCCGGC-
-CTTCCNGGAA

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCTGCCCGGC----
--GGCCCCGCCCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCTGCCCGGC------
TACGCCCCGCCACTCTG

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTGCCCGGC---
GGGTGTGCCCAAAAGG

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTGCCCGGC-
NCTTCCCGCCC