Information for 24-ACGGAMGG (Motif 35)


Reverse Opposite:

p-value:1e-5
log p-value:-1.238e+01
Information Content per bp:1.843
Number of Target Sequences with motif1197.0
Percentage of Target Sequences with motif7.05%
Number of Background Sequences with motif2054.6
Percentage of Background Sequences with motif6.21%
Average Position of motif in Targets244.6 +/- 129.4bp
Average Position of motif in Background235.0 +/- 132.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ACGGAMGG
GAGCCGGAAG-

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACGGAMGG
ACCGGAAG-

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAMGG-
RCCGGAAGTD

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAMGG-
DCCGGAARYN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACGGAMGG
ANCCGGAAGT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAMGG-
RCCGGAARYN

MA0062.2_GABPA/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACGGAMGG---
CCGGAAGTGGC

PB0011.1_Ehf_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACGGAMGG--
AGGACCCGGAAGTAA

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGGAMGG
AACCGGAAGT

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGGAMGG--
NCCGGAAGTGG