Information for 25-TGTCATTCCACC (Motif 36)


Reverse Opposite:

p-value:1e-4
log p-value:-9.237e+00
Information Content per bp:1.985
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets240.8 +/- 120.2bp
Average Position of motif in Background191.6 +/- 96.9bp
Strand Bias (log2 ratio + to - strand density)-4.1
Multiplicity (# of sites on avg that occur together)5.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTCATTCCACC
CNGTCACGCCAC-

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGTCATTCCACC
TTGAATGAAATTCGA--

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTCATTCCACC-
-CACATTCCTCCG

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTCATTCCACC
NCTGTCAATCAN--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTCATTCCACC
--RCATTCCWGG

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTCATTCCACC
-GTCATN-----

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTCATTCCACC
AGCTGTCACTCACCT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTCATTCCACC
--GCATTCCAGN

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTCATTCCACC
-ATCACCCCAT-

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTCATTCCACC
--RCATTCCWGG