Information for 7-TTTTTCACGATA (Motif 4)


Reverse Opposite:

p-value:1e-34
log p-value:-7.832e+01
Information Content per bp:1.893
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets272.3 +/- 108.0bp
Average Position of motif in Background74.1 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTCACGATA
TTTTTTTTCNNGTN-

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTCACGATA---
ANNATTTTACGACNTNA

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCACGATA---
NNNTTTTACGACNTTN

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCACGATA---
NNGTTTTACGACTTTA

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCACGATA---
ANATTTTACGAGNNNN

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTTTTCACGATA-
-TTTTCGCGCGAA

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTCACGATA---
GNNNTTTTACGACCTNA

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCACGATA---
ANNTTTTACGACNTNN

MA0030.1_FOXF2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTCACGATA-
NTTGTTTACGTTNN

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTCACGATA---
NNNATTTTACGACNNTN