Information for 8-ACACACACACAC (Motif 5)


Reverse Opposite:

p-value:1e-30
log p-value:-6.965e+01
Information Content per bp:1.654
Number of Target Sequences with motif776.0
Percentage of Target Sequences with motif4.57%
Number of Background Sequences with motif978.2
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets229.5 +/- 117.0bp
Average Position of motif in Background240.9 +/- 161.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0472.1_EGR2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACACACACACAC
CCCCCGCCCACGCAC

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACACACACACAC
AGCGGCACACACGCAA

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACACACACACAC
-CRCCCACGCA-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACACACACACAC-
-YCCGCCCACGCN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACACACACACAC
GCCACACCCA---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACACAC
GGCCACACCCAN--

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACACACACACAC-
AGCAACAGCCGCACC

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACACACACACAC
GGCCACACCCA---

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACACACACACAC------
--CGAAGCACACAAAATA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ACACACACACAC-
-------CACGCA