Information for 11-ACTGCTTTGTGA (Motif 6)


Reverse Opposite:

p-value:1e-28
log p-value:-6.624e+01
Information Content per bp:1.983
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets263.0 +/- 122.7bp
Average Position of motif in Background200.6 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTGCTTTGTGA----
ANTCCTTTGTCTNNNN

MA0442.1_SOX10/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ACTGCTTTGTGA
----CTTTGT--

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACTGCTTTGTGA-
---CCWTTGTYYB

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTTGTGA----
TNNTCCTTTGTTCTNNT

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTGCTTTGTGA
---CCWTTGTY-

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTTGTGA----
NNNTCCTTTGTTCTNNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ACTGCTTTGTGA
AATCGCACTGCATTCCG-

MA0143.3_Sox2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACTGCTTTGTGA
---CCTTTGTT-

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACTGCTTTGTGA-
---YCTTTGTTCC

MA0501.1_NFE2::MAF/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCTTTGTGA-
AAANTGCTGAGTCAT