Information for 12-AGTCAGGAGATT (Motif 7)


Reverse Opposite:

p-value:1e-27
log p-value:-6.217e+01
Information Content per bp:1.485
Number of Target Sequences with motif2628.0
Percentage of Target Sequences with motif15.48%
Number of Background Sequences with motif4179.7
Percentage of Background Sequences with motif12.63%
Average Position of motif in Targets235.5 +/- 132.5bp
Average Position of motif in Background234.5 +/- 131.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGTCAGGAGATT
-NACAGGAAAT-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTCAGGAGATT
-NACAGGAAAT-

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGTCAGGAGATT
---CAGGAAAT-

MA0098.2_Ets1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAGGAGATT--
NNNACAGGAAGTGGN

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGTCAGGAGATT
---AAGGAAGTA

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGTCAGGAGATT
-AACAGGAAGT-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGTCAGGAGATT
--ACAGGAAGTG

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGTCAGGAGATT-
--ACAGGAAGTGG

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTCAGGAGATT
CTGAGTCAGCAATTT

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAGGAGATT--
AAGTCAGCANTTTTN