Information for 17-GTGTGTGTTCGT (Motif 13)


Reverse Opposite:

p-value:1e-3
log p-value:-7.697e+00
Information Content per bp:1.961
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets413.0 +/- 0.0bp
Average Position of motif in Background244.8 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGTTCGT
NNGCGTGTGTGCNGCN

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTTCGT
CGTGGGTGGTCC-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTGTTCGT
NTGGGTGTGGCC--

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGTGTGTTCGT
-TGTGGATTNNN

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGTTCGT---
GTGCGTGGGCGGGNG

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGTTCGT
NNTGTGGATTSS-

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGTTCGT
TGGGTGTGGCN--

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGTGTGTTCGT
--GTTTGTT---

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTGTTCGT--
NNNNTTGTGTGCTTNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTGTGTGTTCGT--
----CTGTTCCTGG