Information for 14-ACACATAACC (Motif 18)


Reverse Opposite:

p-value:1e-3
log p-value:-6.955e+00
Information Content per bp:1.883
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif435.5
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets233.0 +/- 177.4bp
Average Position of motif in Background294.9 +/- 238.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACACATAACC--
CGAAGCACACAAAATA

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACACATAACC
TATACATA---

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACACATAACC
KTTCACACCT----

MA0042.1_FOXI1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACACATAACC
AAACAAACANNC

MA0009.1_T/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACACATAACC
TTCACACCTAG--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACACATAACC
TGACACCT----

MA0511.1_RUNX2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACACATAACC-
CAAACCACAAACCCC

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ACACATAACC
NNGGCGACACCTCNNN

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACACATAACC--
AGCGGCACACACGCAA

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----ACACATAACC-
AAAGTAAACAAAAATT