Information for 15-GTATGAGTAG (Motif 19)


Reverse Opposite:

p-value:1e-2
log p-value:-6.270e+00
Information Content per bp:1.907
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif142.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets237.8 +/- 171.7bp
Average Position of motif in Background259.0 +/- 236.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTATGAGTAG-
--TTAAGTGGA

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTATGAGTAG--
-CTTGAGTGGCT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTATGAGTAG--
--TTGAGTGSTT

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTATGAGTAG------
TGCGGAGTGGGACTGG

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTATGAGTAG
-CATGAC---

MA0462.1_BATF::JUN/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTATGAGTAG
GAAATGACTCA

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTATGAGTAG----
NTTNTATGAATGTGNNC

POL002.1_INR/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTATGAGTAG
NNNANTGA----

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTATGAGTAG-
ACTATGAATGAATGAT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTATGAGTAG-
-CTYRAGTGSY