Information for 2-CCATTCGATGAT (Motif 2)


Reverse Opposite:

p-value:1e-7
log p-value:-1.614e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets236.8 +/- 164.4bp
Average Position of motif in Background507.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCATTCGATGAT-
NNNTCCATCCCATAANN

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCATTCGATGAT--------
---TNNNATGATTTCNNCNN

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCATTCGATGAT---
TAATTCAATGAAGTG

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCGATGAT---
NNCATTCATTCATNNN

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCATTCGATGAT-
AATCAATTCAATAATT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCATTCGATGAT
------CATGAC

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCATTCGATGAT----
TCTTTCGAGGAATTTG

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCATTCGATGAT--
NNTAAAAACGATGTTNT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCATTCGATGAT
GCATTCCAGN--

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCATTCGATGAT
ACTAGCCAATCA-----