Information for 15-ATTSAATT (Motif 23)


Reverse Opposite:

p-value:1e0
log p-value:-1.746e+00
Information Content per bp:1.585
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1670.7
Percentage of Background Sequences with motif4.22%
Average Position of motif in Targets250.8 +/- 121.0bp
Average Position of motif in Background281.5 +/- 213.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----ATTSAATT----
NNNTATTGAATTGNNN

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTSAATT--
TAATYNRATTAR

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTSAATT-
GGGATTGCATNN

MA0468.1_DUX4/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTSAATT-
TGATTAAATTA

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTSAATT---
TNGAATTTCATTNAN

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATTSAATT-
NANTTCATTGAATTA

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATTSAATT--
NNANTGATTGATNNNN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTSAATT
GCATTCCAGN

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTSAATT
TAATTGATTA

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTSAATT-----
CCATTGTATGCAAAT