Information for 1-GGGGGGATAT (Motif 4)


Reverse Opposite:

p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.769
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif27.78%
Number of Background Sequences with motif626.4
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets228.5 +/- 140.8bp
Average Position of motif in Background290.5 +/- 210.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGATAT-
ANTNCCGGGGGGAANTT

PB0100.1_Zfp740_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGGATAT-
NANNTGGGGGGGGNGN

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGGATAT
ATTTTNGGGGGGCNN-

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGGATAT
ATGGGGTGAT--

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGGATAT
GTGGGGTGAT--

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGGGGATAT
ATGGGGTGAT--

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGGGGGATAT
-TGGGGA---

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGGGGATAT-----
TGAGGGGGATTAACTAT

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGGATAT---
GGGGGGGGGGGGGGA

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGGATAT
GTGGCGTGACNG