Information for 1-GATTCCATTCGA (Motif 1)


Reverse Opposite:

p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.900
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets218.6 +/- 140.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)6.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GATTCCATTCGA
TNGAATTTCATTNAN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATTCCATTCGA
ATTTTCCATT---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
GCATTCCAGN---

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTCCATTCGA
CAGTTTCGNTTCTN

MA0468.1_DUX4/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
TGATTAAATTA--

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTCCATTCGA
GGGATTGCATNN--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
RCATTCCWGG---

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GATTCCATTCGA
NNNTCCATCCCATAANN

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA---
NNCATTCATTCATNNN

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GATTCCATTCGA
--TTCCTCT---