Information for 15-AGTCGTGCGC (Motif 13)


Reverse Opposite:

p-value:1e-3
log p-value:-7.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background200.2 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTCGTGCGC-----
GGGCCGTGTGCAAAAA

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTCGTGCGC------
-NTCGCGCGCCTTNNN

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCGTGCGC
RTACGTGC--

MA0027.1_En1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCGTGCGC
AAGTAGTGCCC

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTCGTGCGC
GGACGTGC--

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGTGCGC----
NCANGCGCGCGCGCCA

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGTCGTGCGC
ATGGAAAGTCGTAAAA

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTCGTGCGC
-TACGTGCV-

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTGCGC---
NNGCNCTGCGCGGC

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGCGC--
CAAAGGCGTGGCCAG