Information for 6-GTGCTCTG (Motif 16)


Reverse Opposite:

p-value:1e-2
log p-value:-5.214e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif892.7
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets213.5 +/- 155.2bp
Average Position of motif in Background238.6 +/- 180.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GTGCTCTG---
CGAACAGTGCTCACTAT

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTGCTCTG
--GCTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGCTCTG
-NGCTN--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGCTCTG
CNGTCCTCCC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GTGCTCTG---
NNANTGGTGGTCTTNNN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTCTG
TTAAGTGCTT--

MA0160.1_NR4A2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGCTCTG
GTGACCTT

MA0512.1_Rxra/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGCTCTG
NCTGACCTTTG

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GTGCTCTG--
ACTCCAAGTACTTGGAA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTCTG-----
NNNANTGCAGTGCNNTT