Information for 12-CACACACT (Motif 18)


Reverse Opposite:

p-value:1e-1
log p-value:-2.677e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif2346.3
Percentage of Background Sequences with motif6.48%
Average Position of motif in Targets220.8 +/- 152.3bp
Average Position of motif in Background234.0 +/- 297.0bp
Strand Bias (log2 ratio + to - strand density)-4.0
Multiplicity (# of sites on avg that occur together)5.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----CACACACT---
AGCGGCACACACGCAA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CACACACT-
GGCCACACCCAN

MA0493.1_Klf1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACACACT
GGCCACACCCA

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACACACT---
CGAAGCACACAAAATA

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACACACT-----
CTCACACAATGGCGC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACACACT
GCCACACCCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACACACT
CACGCA--

MA0472.1_EGR2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CACACACT---
CCCCCGCCCACGCAC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACACACT
GCCMCRCCCH

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACACACT
NANANAC-