Information for 4-ATGATGAT (Motif 7)


Reverse Opposite:

p-value:1e-3
log p-value:-7.985e+00
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1593.7
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets264.1 +/- 165.6bp
Average Position of motif in Background248.8 +/- 272.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)3.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--ATGATGAT-----
TAATGATGATCACTA

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATGATGAT-
NNCTNAATTATGANN

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATGATGAT----
TATAATTATAATATTC

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGAT----
NNTAATTATAATNANN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATGATGAT
--CATGAC

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATGATGAT----
GCTAATTATAATTATC

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGAT----
NCGTATTATAATCNTA

MA0488.1_JUN/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGATGAT-----
AAGATGATGTCAT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGATGAT---
AAAWWTGCTGACWWD

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGATGAT-----
AAACATAATGAGGTTGC