Information for 1-GATTSCATTCGA (Motif 1)


Reverse Opposite:

p-value:1e-50
log p-value:-1.164e+02
Information Content per bp:1.881
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.5 +/- 93.7bp
Average Position of motif in Background164.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTSCATTCGA
GGGATTGCATNN--

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATTSCATTCGA
TNGAATTTCATTNAN

MA0468.1_DUX4/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATTSCATTCGA
TGATTAAATTA--

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATTSCATTCGA
ATTTTCCATT---

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GATTSCATTCGA
CAGTTTCGNTTCTN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATTSCATTCGA
GCATTCCAGN---

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GATTSCATTCGA-
NAGATWNBNATCTNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATTSCATTCGA---
NNTTTGCACACGGCCC

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GATTSCATTCGA
CNGTGATTTN------

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GATTSCATTCGA
-ATTGCATCAK-