Information for 3-ATGCTAGC (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.575
Number of Target Sequences with motif357.0
Percentage of Target Sequences with motif8.08%
Number of Background Sequences with motif2675.5
Percentage of Background Sequences with motif5.89%
Average Position of motif in Targets166.8 +/- 94.7bp
Average Position of motif in Background162.3 +/- 92.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGCTAGC
-NGCTN--

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATGCTAGC------
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGCTAGC------
ACTTGCTACCTACACC

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGC-----
ANNNATGATACCCCATC

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGC-----
ANANNTGATACCCNATN

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATGCTAGC--
GATAACATCCTAGTAG

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGC-----
AATNTTGATACCCTATN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGCTAGC
CNGTCCTCCC

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGC-----
ANANGTGATACCCCATT

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGC-----
ANANGTGATACCCTATN