Information for 4-YRTTGCCT (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.734
Number of Target Sequences with motif1289.0
Percentage of Target Sequences with motif29.16%
Number of Background Sequences with motif11507.1
Percentage of Background Sequences with motif25.31%
Average Position of motif in Targets166.9 +/- 95.9bp
Average Position of motif in Background163.8 +/- 93.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--YRTTGCCT--
GGGATTGCATNN

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YRTTGCCT---
-ATTGCATCAK

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YRTTGCCT--
-ATTGCATAA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:YRTTGCCT---
-ATTGCATCAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YRTTGCCT---
-ATTTCCTGTN

MA0466.1_CEBPB/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YRTTGCCT---
TATTGCACAAT

MA0102.3_CEBPA/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YRTTGCCT----
-ATTGCACAATA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-YRTTGCCT-
GCATTCCAGN

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----YRTTGCCT----
NNNTCCATCCCATAANN

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YRTTGCCT-
NNACTTGCCTT