Information for 16-ACTGCGTMCS (Motif 13)


Reverse Opposite:

p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.577
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif283.7
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets164.1 +/- 89.7bp
Average Position of motif in Background166.1 +/- 91.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTGCGTMCS----
TCTTTGGCGTACCCTAA

MA0131.1_HINFP/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTGCGTMCS-
-TAACGTCCGC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTGCGTMCS---
---CTGTTCCTGG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACTGCGTMCS--
--NRYTTCCGGH

MA0007.2_AR/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACTGCGTMCS-
GNACANNNTGTTCTT

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTGCGTMCS
--TACGTGCV

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACTGCGTMCS---
---RCATTCCWGG

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ACTGCGTMCS
NAGNACANNNTGTNCT

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACTGCGTMCS-------
-GTACATCCGGATTTTT

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTGCGTMCS---
GAGCCCTTGTCCCTAA