Information for 17-ACGCACACACAC (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.690
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif1490.0
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets166.4 +/- 89.4bp
Average Position of motif in Background163.2 +/- 88.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0472.1_EGR2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACGCACACACAC
CCCCCGCCCACGCAC

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACGCACACACAC--
AGCGGCACACACGCAA

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACGCACACACAC
-CRCCCACGCA-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACGCACACACAC
YCCGCCCACGCN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACGCACACACAC
GGCCACACCCAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACGCACACACAC
-GCCACACCCA-

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACGCACACACAC
GGCCACACCCA-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACGCACACACAC
-----CACGCA-

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGCACACACAC--
CGAAGCACACAAAATA

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACGCACACACAC-
TCCGCCCCCGCATT