Information for 19-GGTACACTCG (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.882
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets141.9 +/- 85.3bp
Average Position of motif in Background182.8 +/- 96.6bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)2.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTACACTCG---
AGCGGCACACACGCAA

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGTACACTCG---
NNNNGGTACCCCCCANN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTACACTCG
CCAGGAACAG---

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGTACACTCG---
TTNGGGTACGCCNNANN

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTACACTCG-----
NNAATTCTCGNTNAN

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTACACTCG-----
AGTATTCTCGGTTGC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTACACTCG-
NDGTAAACARRN

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGTACACTCG
GGTAAGTA------

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTACACTCG----
NNTTTGCACACGGCCC

MA0157.1_FOXO3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGTACACTCG
TGTAAACA--