Information for 10-TGGTCCGG (Motif 19)


Reverse Opposite:

p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.952
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif117.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets150.6 +/- 85.0bp
Average Position of motif in Background152.0 +/- 96.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TGGTCCGG
CGTGGGTGGTCC--

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGTCCGG
-GCTCCG-

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGTCCGG---
-CTTCCGGNNN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCCGG--
NNANTGGTGGTCTTNNN

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGTCCGG---
-GGTCCCGCCC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGTCCGG-
NRYTTCCGGY

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCCGG-
CTGTTCCTGG

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCCGG----
NNTNAGGGGCGGNNNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGTCCGG---
-GGTCTGGCAT

PB0094.1_Zfp128_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCCGG------
TTNGGGTACGCCNNANN