Information for 6-ATCATCGAATGG (Motif 2)


Reverse Opposite:

p-value:1e-29
log p-value:-6.834e+01
Information Content per bp:1.782
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets160.1 +/- 107.2bp
Average Position of motif in Background96.7 +/- 94.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------ATCATCGAATGG
AAGGCGAAATCATCGCA---

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCGAATGG---
NNNTATTGAATTGNNN

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCGAATGG
TAGTGATCATCATTA--

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATCATCGAATGG
NANTTCATTGAATTA

MA0151.1_ARID3A/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATCATCGAATGG
---ATTAAA---

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATCATCGAATGG
GTCATN------

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATCATCGAATGG-
ACTATGAATGAATGAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGAATGG----
TATTATGGGATGGATAA

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ATCATCGAATGG-
TNAGNTGATCAACCGGT

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCGAATGG----
NANTTTCAAGTGGTTAN