Information for 22-GGGCGTGGGAAG (Motif 24)


Reverse Opposite:

p-value:1e-4
log p-value:-9.885e+00
Information Content per bp:1.976
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets146.3 +/- 101.8bp
Average Position of motif in Background99.3 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGGCGTGGGAAG-
---CSTGGGAAAD

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGTGGGAAG
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGGGAAG
TGGGTGGGGC---

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGGGAAG
DGGGYGKGGC---

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGCGTGGGAAG---
GTGCGTGGGCGGGNG

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGGGAAG
GGGGNGGGGC---

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGGGAAG
TGGGTGTGGCN--

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGCGTGGGAAG-
-NGCGTGGGCGGR

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCGTGGGAAG-
--GGGCGGGAAGG

MA0469.1_E2F3/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGTGGGAAG
NNGTGNGGGCGGGAG-