Information for 24-GAGGGGGCTA (Motif 26)


Reverse Opposite:

p-value:1e-2
log p-value:-5.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets145.6 +/- 94.2bp
Average Position of motif in Background191.7 +/- 88.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGGCTA-
ANTGCGGGGGCGGN

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAGGGGGCTA--
TGCGGAGTGGGACTGG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGGCTA
GGGGGGGG---

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGGCTA----
NNNAAGGGGGCGGGNNN

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGGCTA------
GCTGGGGGGTACCCCTT

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGGCTA
GGAGGGGGAA-

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGGCTA--
NTNTGGGGGGTCNNNA

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGGGGGCTA
TGTCAGGGGGCG-

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGGCTA-
ATTTTNGGGGGGCNN

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGGGCTA---
GGCGGGGGCGGGGG