Information for 11-CSAAAAAAAMMA (Motif 4)


Reverse Opposite:

p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.457
Number of Target Sequences with motif1487.0
Percentage of Target Sequences with motif33.64%
Number of Background Sequences with motif13195.0
Percentage of Background Sequences with motif29.03%
Average Position of motif in Targets164.9 +/- 83.0bp
Average Position of motif in Background163.0 +/- 99.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CSAAAAAAAMMA--
GTTAAAAAAAAAAATTA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CSAAAAAAAMMA
TACTGGAAAAAAAA--

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CSAAAAAAAMMA--
GTTCAAAAAAAAAATTC

MA0041.1_Foxd3/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CSAAAAAAAMMA--
--AAACAAACATTC

MA0042.1_FOXI1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CSAAAAAAAMMA--
--AAACAAACANNC

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CSAAAAAAAMMA
AGCCGAAAAAAAAAT

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CSAAAAAAAMMA
--AAATAAACA-

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CSAAAAAAAMMA
---NANANAC--

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CSAAAAAAAMMA---
AACAAACAACAAGAG

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CSAAAAAAAMMA
ATGCTAAAAATAGAA