Information for 12-CGCGGCTTTTTG (Motif 5)


Reverse Opposite:

p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets150.7 +/- 88.4bp
Average Position of motif in Background207.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)3.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTTTTTG-
GGNGCGNCTGTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTG
ANCGCGCGCCCTTNN-

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTG
NTCGCGCGCCTTNNN-

MA0442.1_SOX10/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGCGGCTTTTTG
-----CTTTGT-

MA0042.1_FOXI1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGCGGCTTTTTG---
---GGATGTTTGTTT

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGCGGCTTTTTG---
CACGGCAGTTGGTNN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCGGCTTTTTG
--CAGCTGTT--

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTTTG--
----CCWTTGTYYB

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGCTTTTTG-
TTTTACGACTTTCCAT

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTG
---NGCTN----