Information for 13-TCCGACTCCGAT (Motif 6)


Reverse Opposite:

p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.773
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.8 +/- 89.1bp
Average Position of motif in Background127.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCGACTCCGAT
NNAGTCCCACTCNNNN

MA0028.1_ELK1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCGACTCCGAT
CTTCCGGNNN----

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCCGACTCCGAT---
TACGAGACTCCTCTAAC

PB0011.1_Ehf_1/Jaspar

Match Rank:4
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TCCGACTCCGAT
TNACTTCCGGNTNNN--

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTCCGAT
NRYTTCCGGH------

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTCCGAT
NRYTTCCGGY------

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTCCGAT
HACTTCCGGY------

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------TCCGACTCCGAT
CCGTCTTCCCCCTCAC--

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TCCGACTCCGAT
GCTCCG--------

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---TCCGACTCCGAT
ACTTCCGGNT-----