Information for 8-ANCTTATAGT (Motif 7)


Reverse Opposite:

p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.764
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif611.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets172.3 +/- 92.1bp
Average Position of motif in Background164.5 +/- 90.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0109.1_Hltf/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ANCTTATAGT
AACCTTATAT-

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ANCTTATAGT----
TAAGATTATAATACGG

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ANCTTATAGT----
NANTATTATAATTNNN

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ANCTTATAGT
NNNNNNCTTTTATAN-

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------ANCTTATAGT
NNNNNNCTTTTATAN-

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ANCTTATAGT----
NNTAATTATAATTNNN

MA0164.1_Nr2e3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ANCTTATAGT
CAAGCTT-----

MA0029.1_Mecom/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ANCTTATAGT
TNTTATCTTATCTT

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ANCTTATAGT----
NNTAATTATAATNANN

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ANCTTATAGT---
-CCTTTTATAGNC