Information for 10-GACGGTTA (Motif 13)


Reverse Opposite:

p-value:1e-5
log p-value:-1.223e+01
Information Content per bp:1.872
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif1378.2
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets185.3 +/- 112.9bp
Average Position of motif in Background192.7 +/- 111.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GACGGTTA
GGCVGTTR

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GACGGTTA-
BRRCVGTTDN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GACGGTTA
TGTCGGTT-

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTA----
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTTA----
NNNNTAACGGTTNNNAN

PB0179.1_Sp100_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACGGTTA----
TCCGTCGCTTAAAAG

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACGGTTA-
TGGCAGTTGG

MA0100.2_Myb/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACGGTTA-
TGGCAGTTGN

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACGGTTA--------
TGATTGTTAACAGTTGG

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GACGGTTA----
NNNTGGCAGTTGGTNN