Information for 16-CATCAGTTGA (Motif 15)


Reverse Opposite:

p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.942
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif193.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets213.2 +/- 113.6bp
Average Position of motif in Background185.9 +/- 111.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CATCAGTTGA
BRRCVGTTDN

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATCAGTTGA---
CACGGCAGTTGGTNN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATCAGTTGA
NAHCAGCTGD

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTTGA
GCCATCTGTT--

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATCAGTTGA---
GAAGAACAGGTGTCCG

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATCAGTTGA---
NNNTGGCAGTTGGTNN

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATCAGTTGA--
TCACCCATCAATAAACA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATCAGTTGA
ATTGCATCAT----

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATCAGTTGA
ATTGCATCAK----

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATCAGTTGA
TGGCAGTTGG