Information for 17-CCCATCACAC (Motif 16)


Reverse Opposite:

p-value:1e-4
log p-value:-9.463e+00
Information Content per bp:1.911
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif656.5
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets182.2 +/- 109.5bp
Average Position of motif in Background200.4 +/- 115.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCCATCACAC-
ATTTCCCAGVAKSCY

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCATCACAC----
TCACCCATCAATAAACA

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCATCACAC------
CGAAGCACACAAAATA

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCATCACAC------
AGCGGCACACACGCAA

MA0088.1_znf143/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCATCACAC-----
GATTTCCCATAATGCCTTGC

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCATCACAC--
--KTTCACACCT

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCATCACAC---
---ATCACCCCAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------CCCATCACAC
NNNTCCATCCCATAANN-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCATCACAC--
NWAACCACADNN

MA0596.1_SREBF2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCCATCACAC---
---ATCACCCCAT