Information for 21-ATATATTATATA (Motif 18)


Reverse Opposite:

p-value:1e-4
log p-value:-9.269e+00
Information Content per bp:1.894
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets154.9 +/- 82.5bp
Average Position of motif in Background192.2 +/- 104.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)2.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATATTATATA----
TCTTTATATATAAATA

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATATATTATATA
----TATACATA

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATATATTATATA--
AAATAAGAAAAAAC

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATATATTATATA---
CCGTATTATAAACAA

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATATATTATATA
ATGCATAATTCA

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATATATTATATA
ANNNGGATATATCCNNN-

MA0025.1_NFIL3/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATATATTATATA-
--ANGTTACATAA

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATATATTATATA--------
-----GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATATATTATATA--------
-----GTATAAAAGGCGGGG

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATATATTATATA---
-AATATTAATAAAGA