Information for 16-TATCATGA (Motif 21)


Reverse Opposite:

p-value:1e-3
log p-value:-7.514e+00
Information Content per bp:1.955
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif951.0
Percentage of Background Sequences with motif1.97%
Average Position of motif in Targets192.5 +/- 104.2bp
Average Position of motif in Background190.4 +/- 110.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TATCATGA-
---CATGAC

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATCATGA----
NNTNTCATGAATGT

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------TATCATGA--
GATGGGGTATCATTTTT

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TATCATGA--
AATAGGGTATCAATATT

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TATCATGA---
GWAAYHTGABMC

PB0105.1_Arid3a_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TATCATGA--
ACCCGTATCAAATTT

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TATCATGA--
AATAGGGTATCATATAT

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TATCATGA--
GATAGGGTATCACTAAT

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TATCATGA--
AATGGGGTATCACGTTT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TATCATGA------
AAACATAATGAGGTTGC