Information for 23-GACSTCTATC (Motif 22)


Reverse Opposite:

p-value:1e-2
log p-value:-5.384e+00
Information Content per bp:1.777
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif56.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets156.7 +/- 111.9bp
Average Position of motif in Background184.2 +/- 99.3bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)2.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GACSTCTATC-
NNNNTTGACCCCTNNNN

MA0071.1_RORA_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACSTCTATC
TGACCTTGAT-

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACSTCTATC
TGACGTCA---

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACSTCTATC
TGACGT-----

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACSTCTATC-
AGGTCTCTAACC

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GACSTCTATC-
NNNNTGACCTTTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GACSTCTATC-
TGTCGTGACCCCTTAAT

MA0504.1_NR2C2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACSTCTATC----
TGACCTCTGACCCCN

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACSTCTATC---
TGACCTTTGACCTC

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GACSTCTATC
GAATGACGAATAAC