Information for 25-TCAACCCAGCTG (Motif 24)


Reverse Opposite:

p-value:1e-1
log p-value:-3.626e+00
Information Content per bp:1.977
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 104.3bp
Average Position of motif in Background204.3 +/- 83.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)9.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCAACCCAGCTG-
---NAHCAGCTGD

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCAACCCAGCTG---
----CACAGCTGCAG

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCAACCCAGCTG-
---NNACAGCTGC

MA0048.1_NHLH1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCAACCCAGCTG---
---NCGCAGCTGCGN

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TCAACCCAGCTG---
-----NCAGCTGCTG

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCAACCCAGCTG--
--NNVVCAGCTGBN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TCAACCCAGCTG--
------CAGCTGTT

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCAACCCAGCTG-
---NAACAGCTGT

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCAACCCAGCTG--
---NNGCAGCTGTC

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TCAACCCAGCTG--
------CAGCTGNT