Information for 9-THCTTTCWTT (Motif 4)


Reverse Opposite:

p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.755
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif10.28%
Number of Background Sequences with motif2742.2
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets186.6 +/- 99.6bp
Average Position of motif in Background195.4 +/- 115.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:THCTTTCWTT---
-ACTTTCGTTTCT

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:THCTTTCWTT---
-ACTTTCACTTTC

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-THCTTTCWTT----
TCACTTTCACTTTCN

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---THCTTTCWTT----
NNTTCCTTTGATCTNNA

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---THCTTTCWTT----
NNNTCCTTTGTTCTNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---THCTTTCWTT----
ATTTCCTTTGATCTATA

MA0523.1_TCF7L2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-THCTTTCWTT---
TNCCTTTGATCTTN

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---THCTTTCWTT----
NNTTCCTTTGATCTANA

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---THCTTTCWTT----
TNNTCCTTTGTTCTNNT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:THCTTTCWTT
TGGTTTCAGT