Information for 11-ATCCGATAGC (Motif 5)


Reverse Opposite:

p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets153.9 +/- 103.1bp
Average Position of motif in Background106.2 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATCCGATAGC-
NNNTCCATCCCATAANN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCCGATAGC
NRYTTCCGGH---

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATCCGATAGC--
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATCCGATAGC--
ATGGAAACCGTTATTTT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCCGATAGC
NRYTTCCGGY---

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATCCGATAGC-
CATACAATACGAAATAA

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCCGATAGC
AACCGANA--

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATCCGATAGC
CNATAATCCGNTTNT

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------ATCCGATAGC
AATCGTTAATCCCTTTA-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATCCGATAGC
GCTAATCC------