Information for 13-GACACACWCATG (Motif 6)


Reverse Opposite:

p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.734
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif46.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets179.7 +/- 95.5bp
Average Position of motif in Background211.3 +/- 112.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACACACWCATG
GGCCACACCCAN-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GACACACWCATG
GCCACACCCA--

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GACACACWCATG-
AGCGGCACACACGCAA

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACACACWCATG
GGCCACACCCA--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACACACWCATG
-AGCCACTCAAG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACACACWCATG
GCCMCRCCCH--

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GACACACWCATG----
GACCACATTCATACAAT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GACACACWCATG
----CACGCA--

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACACACWCATG-
CGAAGCACACAAAATA

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GACACACWCATG
CRCCCACGCA--