Information for 1-TCGAWTSGAATC (Motif 1)


Reverse Opposite:

p-value:1e-31
log p-value:-7.297e+01
Information Content per bp:1.544
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets263.0 +/- 154.8bp
Average Position of motif in Background281.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)6.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCGAWTSGAATC-
--TAATTTAATCA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCGAWTSGAATC-
---NCTGGAATGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCGAWTSGAATC--
--AGATGCAATCCC

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCGAWTSGAATC
--TAATTGATTA

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCGAWTSGAATC--
GAGAACCGAAACTG

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCGAWTSGAATC----
-CGTATCGAAACCAAA

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCGAWTSGAATC---
TTGAATGAAATTCGA

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TCGAWTSGAATC----
------CAAATCACTG

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCGAWTSGAATC
NNTGTGGATTSS----

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TCGAWTSGAATC
AATTTCAAGTGGCTTN