Information for 9-GTCCATGTGC (Motif 10)


Reverse Opposite:

p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.655
Number of Target Sequences with motif419.0
Percentage of Target Sequences with motif9.31%
Number of Background Sequences with motif3058.6
Percentage of Background Sequences with motif6.71%
Average Position of motif in Targets277.3 +/- 153.6bp
Average Position of motif in Background274.3 +/- 165.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0058.2_MAX/Jaspar

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:GTCCATGTGC--
--CCATGTGCTT

MA0147.2_Myc/Jaspar

Match Rank:2
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GTCCATGTGC--
--CCATGTGCTT

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTCCATGTGC-
-KCCACGTGAC

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTCCATGTGC--
--CCACGTGGNN

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTCCATGTGC--
--CCACGTGGNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCCATGTGC-----
ATCCACAGGTGCGAAAA

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATGTGC-
NNACCACGTGGT

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTCCATGTGC-
---CACGTGNC

MA0059.1_MYC::MAX/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCCATGTGC--
-ACCACGTGCTC

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCCATGTGC
-GCCACGTG-