Information for 12-ACAACCTGCCTG (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets274.5 +/- 138.3bp
Average Position of motif in Background304.3 +/- 165.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACAACCTGCCTG
-NNACTTGCCTT

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACAACCTGCCTG--
CGACCAACTGCCATGC

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACAACCTGCCTG
-CCAACTGCCA-

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAACCTGCCTG-
CGACCAACTGCCGTG

MA0598.1_EHF/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACAACCTGCCTG
----CCTTCCTG

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACAACCTGCCTG
--TACGTGCV--

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAACCTGCCTG
-CCAACTGCCA-

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAACCTGCCTG
NNCACCTGNN--

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACAACCTGCCTG
-RTACGTGC---

MA0059.1_MYC::MAX/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACAACCTGCCTG
ACCACGTGCTC-